odgi view¶
projection of graphs into other formats
SYNOPSIS¶
odgi view [-i, –idx=FILE] [OPTION]…
DESCRIPTION¶
The odgi view(1) command can convert a graph in odgi format to GFAv1. It can reveal a graph’s internal structures for e.g. debugging processes.
OPTIONS¶
Graph Files IO¶
-i, –idx=FILE
File containing the succinct variation graph to convert from. The file
name usually ends with .og.
-g, –to-gfa
Write the graph in GFAv1 format to standard output.
Summary Options¶
-d, –display
Show the internal structures of a graph. Print to stdout the maximum
node identifier, the minimum node identifier, the nodes vector, the
delete nodes bit vector and the path metadata, each in a separate
line.
Program Information¶
-h, –help
Print a help message for odgi view.