odgi squeeze¶
squeezes multiple graphs into the same file
SYNOPSIS¶
odgi squeeze [-f, –input-graphs=FILE] [-o, –out=FILE] [OPTION]…
DESCRIPTION¶
The odgi squeeze(1) command merges multiple graphs into the same file.
OPTIONS¶
Graph Files IO¶
-f, –input-graphs=FILE
Input file containing the list of graphs to squeeze into the same
file. The file must contain one path per line.
-o, –out=FILE
Store all the input graphs in this file. The file name usually ends
with .og.
Squeeze Options¶
-s, –rank-suffix=STRING
Add the separator and the input file rank as suffix to the path names
(to avoid path name collisions).
-O, –optimize
Compact the node ID space in each input file before imploding.
Threading¶
-t, –threads=N
Number of threads to use.
Processing Information¶
-P, –progress
Print information about the progress to stderr.
Program Information¶
-h, –help
Print a help message for odgi squeeze.