Computational pangenomics course, conference, and biohackathon in Memphis, TN, exploring the cutting edge of pangenomes, biology, methods, software, and artificial intelligence (AI).

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Important Dates

  • Practical course/Conference/Biohackathon Registration Deadline: 1st April 2026

  • Selected participants will be notified by: 7th April 2026

  • Payment Deadline: 21st April 2026

  • Practical course / Workshop: 11th-12th May 2026

  • Conference: 13th May 2026

  • Biohackathon: 14th-15th May 2026

OPEN CALL FOR SPEAKERS

We invite experts and enthusiasts in pangenome research to present at MemPanG26. This event is scheduled for May 13th, 2026, and aims to delve into the multifaceted world of pangenome research. The submission deadline for talk proposals is April 15th, 2026.

Focus Areas: Our conference will cover a broad range of topics, including but not limited to, methods in pangenome research, genome assembly, data visualization, artificial intelligence (AI), and collaborative projects.

Diverse Perspectives: We are looking for speakers who can provide insights from different species contexts and who can discuss topics that lie at the intersection of pangenome methods and biology. We are particularly interested in hearing about your unique work and perspectives in pangenome research.

Duration: Each talk should be 20 minutes, followed by a Q&A session, amounting to a total of 25 minutes.

Submission: We kindly request you to forward the title and abstract of your talk upon confirmation of your participation.

Location: The event will be held in Memphis.

We look forward to an engaging day of discussion!

MemPanG26 organizers

Venues

Practical course / Workshop

Freeman Auditorium at the Hamilton Eye Institute
930 Madison Ave,
3rd floor,
Memphis, TN 38103
United States
See the venue on the map

Conference

Freeman Auditorium at the Hamilton Eye Institute
930 Madison Ave,
3rd floor,
Memphis, TN 38103
United States
See the venue on the map

Biohackathon

Room 100 and 101, UTHSC Translational Research Science Building
71 S Manassas St,
Memphis, TN 38103
United States
See the venue on the map

Transportation in Memphis

If you stay in Downtown, the Medical District, South City, or New Chicago, you can reach the event venue by getting on-demand, convenient, and affordable rides with Groove On-Demand.

About the practical course / workshop

Monday, May 11, 2026 - Tuesday, May 12, 2026
The use of a single reference genome in bioinformatics can lead to reference bias and miss important information about genome variability and relationships. New assembly methods have made it easier to generate high-quality complete genome assemblies, and using a pangenome graph that expresses many genomes and their mutual alignment can help address these issues. This practical course / workshop will focus on building such graphs from whole genome assemblies and using them in various downstream applications in comparative genomics, evolution, variation analysis, sequence alignment, and phenotype association.

Participants will learn about pangenome concepts and gain practical experience building and analyzing pangenome graphs. They will apply these methods to complex research questions that require understanding the relationships between multiple genomes or accounting for variability when analyzing new genomes. By the end of the practical course / workshop, participants will have a strong understanding of pangenome methods based on whole genome assemblies.

About the conference

Wednesday, May 13, 2026
We will gather for an in-person conference on the day after the practical course / workshop. This will bring together practical course / workshop participants and virtual and in-person speakers who are actively working on diverse aspects of pangenome research. The virtual meeting will be open to the public. Speakers will cover topics at the intersection of pangenome methods and biology, including a focus on basic methods, data structures, genome assembly, data visualization, and public collaborative pangenome projects. We expect to draw speakers from a diverse set of species contexts.

About the biohackathon

Thursday, May 14, 2026 - Friday, May 15, 2026

The biohackathon focuses on software development. We will work with/on pangenomic tools (such as PGGB, WFMASH, IMPG, SEQWISH, ODGI, SMOOTHXG, VG, VCFLIB, GEMMA) with software project leadership. You are welcome to bring your own projects!

People

Instructors

Erik Garrison - Associate Professor

University of Tennessee Health Science Center, Memphis, TN, US

erik Genomicist with a quantitative social science background. I build methods that let us understand the precise relationships between thousands of genomes. In these, the genome is encoded in a graph that may represent a population sample of individuals from the same species, a metagenome, the diploid genome of a single individual, or any other useful collection of sequences.

uthsc    git   GitHub

Andrea Guarracino - Assistant Professor

Translational Genomics Research Institute, Phoenix, AZ, US

andrea Computer scientist who applies pangenomics to the study of genome variation and disease.

tgen    lab   Lab Website


Helpers


Organizers

  • Andrea Guarracino, Translational Genomics Research Institute, Phoenix, AZ, US

  • Erik Garrison, University of Tennessee Health Science Center, Memphis, TN, US

  • Flavia Villani, Translational Genomics Research Institute, Phoenix, AZ, US

  • Pjotr Prins, University of Tennessee Health Science Center, Memphis, TN, US

  • Vincenza Colonna, University of Tennessee Health Science Center, Memphis, TN, US

  • Tamara Brock, University of Tennessee Health Science Center, Memphis, TN, US

uthsc

University of Tennessee Health Science Center, Department of Genetics, Genomics and Informatics

Program

Practical course / Workshop

Time: Monday-Tuesday, 11th-12th May 2026

Biohackathon

Time: Thursday-Friday, 14th-15th May 2026

Registration and Practical Information

Registration includes access to: all lectures and practical sessions, all course materials.

Cost

The cost includes all expenses associated with the event, with lunches, coffee, and snacks. In certain circumstances, we can waive the fees.

  • Academic - $250, with financial support if needed

  • Industry - $500

Selection criteria

This practical course / workshop is intended for biologists and bioinformaticians interested in studying organisms with high genetic diversity or without a reference genome, as well as those involved in comparative genomics and the assembly of pangenomes for any species.

Selection of participants will be based on:

  • good knowledge of Linux operating system and basic shell commands. This will be a mandatory prerequisite.

  • familiarity with genomics data formats (e.g., FASTA, VCF, BED, …​) is a plus.

  • impact of the practical course / workshop for the participant and their research group.

  • stage of the research project: priority will be given to participants with data already available and ready to be analyzed (participants data will not be analyzed during the practical course / workshop).

Fulfillment of these conditions by participants will be assessed through the registration form.

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