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Following the HPRC25 conference, we are organizing a biohackathon focused on pangenomic software tools and collaborative development.

Registration

Registration is required and space is limited to 30 participants. Attendance is free to anyone. Lunch not provided; options nearby.

Registration deadline: 5th October 2025.

Important Dates

Date Event

October 5, 2025

Registration deadline

October 8-9, 2025

HackPRC25 biohackathon

Venue

Location: Rooms 100-101, Translational Research Science Building (TRSB)
Capacity: Limited to 30 participants

Program Schedule

Coffee breaks provided; lunch not included (options nearby).

Day 1 - October 8, 2025

Time Activity

9:15-9:30

Opening remarks & Introduction

9:30-10:30

Project pitches & Team formation

10:30-11:00

Coffee Break

11:00-12:30

Hacking

12:30-13:30

Lunch (not provided; options nearby) 🍽️

13:30-15:00

Hacking

15:00-15:30

Coffee break

15:30-16:30

Hacking

16:30-17:00

Wrap-up Progress reports

18:00

Group dinner (optional)

Day 2 - October 9, 2025

Time Activity

9:15-9:30

Daily kickoff

9:30-11:00

Hacking

11:00-11:30

Coffee break

11:30-13:00

Hacking

13:00-14:00

Lunch (not provided; options nearby) 🍽️

14:00-15:00

Hacking

15:00-15:30

Coffee break

15:30-16:30

Project presentations

16:30-17:00

Closing remarks

What to expect

The HackPRC25 biohackathon will bring together researchers, developers, and bioinformaticians to work on:

  • Pangenomic software tools development

  • Data analysis pipelines

  • Visualization tools

  • Performance optimization

  • Documentation and testing

  • Coffee breaks provided; participants arrange their own lunch

Who should attend

This biohackathon is designed for:

  • Computational biologists working with pangenomes

  • Software developers interested in genomics

  • Researchers with active pangenome projects

  • Students and postdocs in related fields

Prerequisites

  • Experience with Linux and command-line tools

  • Familiarity with genomic data formats

  • Programming experience (Python, Rust, C++, or similar)

  • Basic knowledge of version control (Git)

Organizers

  • Andrea Guarracino, University of Tennessee Health Science Center, Memphis, TN, US

  • Erik Garrison, University of Tennessee Health Science Center, Memphis, TN, US

  • Pjotr Prins, University of Tennessee Health Science Center, Memphis, TN, US

  • Vincenza Colonna, University of Tennessee Health Science Center, Memphis, TN, US

  • Tamara Brock, University of Tennessee Health Science Center, Memphis, TN, US


This biohackathon is organized as a follow-up to the HPRC25 conference, providing an opportunity for hands-on collaboration and software development in the pangenomics community.